SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    1447, 1426, 1437, 1460, 1464, 1421, 1462, 
    1409, 1416, 1472, 1452, 1425, 1438, 
    1424, 1413, 1450, 1469, 1455, 1443, 
    1418
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00034

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "18.51"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 30,
        "rows_produced_per_join": 5,
        "filtered": "19.97",
        "index_condition": "(`cscartdevel`.`cscart_product_prices`.`product_id` in (1447,1426,1437,1460,1464,1421,1462,1409,1416,1472,1452,1425,1438,1424,1413,1450,1469,1455,1443,1418))",
        "cost_info": {
          "read_cost": "17.91",
          "eval_cost": "0.60",
          "prefix_cost": "18.51",
          "data_read_per_join": "143"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`cscartdevel`.`cscart_product_prices`.`lower_limit` = 1) and (`cscartdevel`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
1409 52.00000000
1413 59.00000000
1416 59.00000000
1418 68.00000000
1421 88.00000000
1424 78.00000000
1425 52.00000000
1426 59.00000000
1437 52.00000000
1438 58.00000000
1443 62.00000000
1447 84.00000000
1450 58.00000000
1452 294.00000000
1455 149.00000000
1460 136.00000000
1462 69.00000000
1464 84.00000000
1469 72.00000000
1472 58.00000000